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1 to 10 of 19 Results
Oct 18, 2019
Santosh P Deshpande, s.deshpande@cgiar.org; Laavanya Rayaprolu, rayaprolulaavanya@gmail.com; Rajeev Gupta, G.Rajeev@cgiar.org; Abhishek Rathore, a.rathore@cgiar.org, 2019, "Genome-wide association study for major biofuel traits in Sorghum minicore collection", https://doi.org/10.21421/D2/GGXBNP, ICRISAT Dataverse, V1
This dataset includes the research work carried out in evaluating biofuel traits in sorghum mini core accessions. The imputed genotypic data have been previously reported (Morris et al., 2013). GBS reads were processed by using default parameters of the TASSEL-5.2 pipeline. The t...
Sep 17, 2019
K N S Usha Kiranmayee; P B Kavi Kishor; C. T. Hash; Santosh, Deshpande, 2019, "Evaluation of QTLs for Shoot Fly (Atherigona soccata) Resistance using 1894 F2 population based on SSR marker data", https://doi.org/10.21421/D2/45YOFR, ICRISAT Dataverse, V1
Seedling leaf blade glossiness and trichome density are morphological traits associated with shoot fly resistance (SFR). A fine-mapping population was developed for shoot fly resistance by crossing introgression lines RSG04008-6 (susceptible) × J2614-11 (resistant). A total of 19...
Sep 17, 2019
K N S Usha Kiranmayee; C. T. Hash; S Sivasubramani; P Ramu; A Bhanu Prakash; Abhishek, Rathore; P B Kavi Kishor; Rajeev Gupta; Santosh, Deshpande, 2019, "Genotyping by Sequencing SNP data for the cross RSG04008-6 × J2614-11 in Sorghum", https://doi.org/10.21421/D2/TO4JWO, ICRISAT Dataverse, V1
This study was conducted to dissect the genetic basis of stay-green Quantitative Trait Loci (QTL) s and shoot fly resistance morphological QTLs on sorghum chromosome SBI-10 long arm (L) using high-density single nucleotide polymorphism (SNP) genetic markers. A fine-mapping popula...
Oct 17, 2018
Rajeev K. Varshney; Chengcheng Shi; Mahendar Thudi; Cedric Mariac; Jason Wallace; Peng Qi; He Zhang; Yusheng Zhao; Xiyin Wang; Abhishek, Rathore; Rakesh K. Srivastava; Annapurna Chitikineni; Guangyi Fan; Prasad Bajaj; Somashekhar Punnuri; Gupta SK; Hao Wang; Yong Jiang; Marie Couderc; Mohan A. V. S. K. Katta; Dev R. Paudel; K. D. Mungra; Wenbin Chen; Karen R. Harris-Shultz; Vanika Garg; Neetin Desai; Dadakhalandar Doddamani; Ndjido Ardo Kane; Joann A. Conner; Arindam Ghatak; Palak Chaturvedi; Sabarinath Subramaniam; Om Prakash Yadav; Cécile Berthouly-Salazar; Falalou Hamidou; Jianping Wang; Xinming Liang; Jérémy Clotault; Hari D. Upadhyaya; Philippe Cubry; Benedicte Rhone; Mame Codou Gueye; Ramanjulu Sunkar; Christian Dupuy; Francesca Sparvoli; Shifeng Cheng; R. S. Mahala; Bharat Singh; Rattan S. Yadav; Eric Lyons; Swapan K. Datta; C. T. Hash; Katrien M. Devos; Edward Buckler; Jeffrey L. Bennetzen; Andrew H. Paterson; Peggy Ozias-Akins; Stefania Grando; Jun Wang; Trilochan Mohapatra; Wolfram Weckwerth; Jochen C. Reif; Xin Liu; Yves Vigouroux; Xun Xu, 2018, "Data files related to Pearl millet draft genome assembly v1.1, scaffolds and annotations", https://doi.org/10.21421/D2/SY6VXQ, ICRISAT Dataverse, V1
The data files contains draft genome sequence of Pearl Millet along with its structural and functional annotation. The sequence of seven chromosomes are available in FASTA file "pearl_millet_v1.1.fa", whereas those assembled sequences (scaffolds) which could not be mapped to any...
Mar 17, 2018
Santisree Parankusam; Pooja B Mathur; Kiran K Sharma, 2018, "Quantitative proteomic data of chickpea leaves primed with nitric oxide donor for stress tolerance", https://doi.org/10.21421/D2/UY20HC, ICRISAT Dataverse, V1, UNF:6:EwZr0DmQGqXI4PT1On1+Xw==
Nitric oxide (NO) has emerged as a central regulator of various growth and developmental events in plants, such as seed germination, root growth, floral transition, senescence and stress defenses. However, the molecular mechanisms and targets of nitric oxide (NO) aren't fully kno...
Feb 11, 2017
Rajeev K. Varshney; Chi Song; Rachit K Saxena; Sarwar Azam; Sheng Yu; Andrew G Sharpe; Steven Cannon; Jongmin Baek; Benjamin D Rosen; Bunyamin Tar'an; Teresa Millan; Xudong Zhang; Larissa D Ramsay; Aiko Iwata; Ying Wang; William Nelson; Andrew D Farmer; Pooran M Gaur; Carol Soderlund; R Varma Penmetsa; Chunyan Xu; Arvind K Bharti; Weiming He; Peter Winter; Shancen Zhao; James K Hane; Noelia Carrasquilla-Garcia; Janet A Condie; Hari D. Upadhyaya; Mingcheng Luo; Mahendar Thudi; CLL Gowda; Narendra P Singh; Judith Lichtenzveig; Krishna K Gali; Josefa Rubio; N Nadarajan; Jaroslav Dolezel; Kailash C Bansal; Xun Xu; David Edwards; Gengyun Zhang; Guenter Kahl; Juan Gil; Karam B Singh; Swapan K Datta; Scott A Jackson; Jun Wang; Douglas R. Cook, 2017, "Data on draft genome sequence of chickpea (Cicer arietinum)", https://doi.org/10.21421/D2/HQZPCV, ICRISAT Dataverse, V1
The dataset contains genome sequence of the ~738 Mb chickpea genome from CDC Frontier, a kabuli variety, which contains an estimated 28,269 genes. Re-sequencing and analysis of 90 cultivated and wild genotypes from 10 different countries identifies both targets of breeding-associ...
Oct 25, 2016
B. N. Gnanesh; Abhishek Bohra; M. Sharma; M. Byregowda; S. Pande; V. Wesley; Rachit K Saxena; K.B. Saxena; P. B. Kavi Kishor; Rajeev K. Varshney, 2016, "Intra-specific genetic map data from ICP 8863 × ICPL 20097 and TTB 7 × ICP 7035 populations", https://doi.org/10.21421/D2/L3GSS7, ICRISAT Dataverse, V1
The datset contains over 3000 SSR markers details on parental genotypes of each mapping population. Intra-specific genetic maps comprising of 11 linkage groups and 120 and 78 SSR loci were developed for ICP 8863 × ICPL 20097 and TTB 7 × ICP 7035 populations, respectively. Composi...
Oct 25, 2016
Abhishek Bohra; Rachit K Saxena; B. N. Gnanesh; K.B. Saxena; M. Byregowda; Abhishek, Rathore; P. B. Kavi Kishor; Douglas R. Cook; Rajeev K. Varshney, 2016, "An intra-specific consensus genetic map data of Pigeonpea", https://doi.org/10.21421/D2/I4OVE2, ICRISAT Dataverse, V1
This dataset contains Markers data and genetic map. The availability of a cytoplasmic male sterility (CMS) system as facilitated the development and release of hybrids which are expected to enhance the productivity of pigeonpea. Recent advances in genomics and molecular breeding...
Oct 25, 2016
Abhishek Bohra; Anuja Dubey; Rachit K Saxena; R. Varma Penmetsa; KN Poornima; Naresh Kumar; Andrew D Farmer; Gudipati Srivani; Hari D. Upadhyaya; Ragini Gothalwal; S Ramesh; Dhiraj Singh; K.B. Saxena; P. B. Kavi Kishor; Nagendra K Singh; Christopher D. Town; Gregory D May; Douglas R. Cook; Rajeev K. Varshney, 2016, "BES-SSR markers map of Pigeonpea from ICP 28 x ICPW 94", https://doi.org/10.21421/D2/XWFWPP, ICRISAT Dataverse, V1
With the objective of enhancing genomic resources for Pigeonpea, this study reports for the first time, large scale development of SSR markers from BAC-end sequences and their subsequent use for genetic mapping and hybridity testing in Pigeonpea CMap Visualization Links: ICP 28 x...
Oct 25, 2016
Bhimana Gautami; Daniel Foncéka; Manish K. Pandey; Márcio C. Moretzsohn; Venkataswamy Sujay; Hongde Qin; Yanbin Hong; Issa Faye; Xiaoping Chen; BhanuPrakash Amindala; Trushar M. Shah; Makanahally V. C. Gowda; Shyam N. Nigam; Xuanqiang Liang; Dave A. Hoisington; Baozhu Guo; David J. Bertioli; Jean-Francois Rami; Rajeev K. Varshney, 2016, "Reference consensus genetic map of Groundnut", https://doi.org/10.21421/D2/WG4WCF, ICRISAT Dataverse, V1
A reference consensus genetic map was developed from 10 RILs and one BC population using the marker segregation data. This map comprised of 897 marker loci including 895 SSR and 2 cleaved amplified polymorphic sequence (CAPS). CMap Visualization Links: Reference consensus genetic...
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