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1 to 10 of 16 Results
25 Oct, 2016
Neha Gujaria; Ashish Kumar; Preeti Dauthal; Anuja Dubey; Pavana J Hiremath; BhanuPrakash Amindala; Andrew D Farmer; Mangla Bhide; Trushar Shah; Pooran M. Gaur; Hari D. Upadhyaya; Sabhyata Bhatia; Douglas R. Cook; Gregory D May; Rajeev K. Varshney, 2016, "Transcript map of Chickpea (Cicer arietinum L.)", doi:10.21421/D2/TOYQD2, ICRISAT Dataverse, V1
A transcript map has been constructed by the development and integration of genic molecular markers (GMMs) including single nucleotide polymorphism (SNP), genic microsatellite or simple sequence repeat (SSR) and intron spanning region (ISR)-based markers, on an inter-specific map...
25 Oct, 2016
Punna Ramu; S. P. Deshpande; S. Senthilvel; B. Jayashree; C. Billot; M. Deu; L. Ananda Reddy; C. T. Hash, 2016, "SSR and QTL map of Sorghum", doi:10.21421/D2/QTQI9R, ICRISAT Dataverse, V1
Genetic map of sorghum consisting of SSRs and QTLs CMap Visualization Links: SorghumMarkers-QTLs Sorghum SSR Markers DOI: doi:10.1007/s11032-009-9365-9
25 Oct, 2016
Bhimana Gautami; Daniel Foncéka; Manish K. Pandey; Márcio C. Moretzsohn; Venkataswamy Sujay; Hongde Qin; Yanbin Hong; Issa Faye; Xiaoping Chen; BhanuPrakash Amindala; Trushar M. Shah; Makanahally V. C. Gowda; Shyam N. Nigam; Xuanqiang Liang; Dave A. Hoisington; Baozhu Guo; David J. Bertioli; Jean-Francois Rami; Rajeev K. Varshney, 2016, "Reference consensus genetic map of Groundnut", doi:10.21421/D2/WG4WCF, ICRISAT Dataverse, V1
A reference consensus genetic map was developed from 10 RILs and one BC population using the marker segregation data. This map comprised of 897 marker loci including 895 SSR and 2 cleaved amplified polymorphic sequence (CAPS). CMap Visualization Links: Reference consensus genetic...
Mar 17, 2018
Santisree Parankusam; Pooja B Mathur; Kiran K Sharma, 2018, "Quantitative proteomic data of chickpea leaves primed with nitric oxide donor for stress tolerance", doi:10.21421/D2/UY20HC, ICRISAT Dataverse, V1, UNF:6:EwZr0DmQGqXI4PT1On1+Xw==
Nitric oxide (NO) has emerged as a central regulator of various growth and developmental events in plants, such as seed germination, root growth, floral transition, senescence and stress defenses. However, the molecular mechanisms and targets of nitric oxide (NO) aren't fully kno...
Oct 25, 2016
Deepa Jaganathan; Mahendar Thudi; Sandip Kale; Sarwar Azam; Manish Roorkiwal; Pooran M. Gaur; P. B. Kavi Kishor; Henry Nguyen; Tim Sutton; Rajeev K. Varshney, 2016, "Intra-specific genetic map data of ICC 4958 x ICC 1882 by Genotyping-by-sequencing approach", doi:10.21421/D2/HQ8RJV, ICRISAT Dataverse, V1
To enhance the marker density in the “QTL-hotspot” region, harboring several QTLs for drought tolerance-related traits identified on linkage group 04 (CaLG04) in chickpea recombinant inbred line (RIL) mapping population ICC 4958 × ICC 1882, a genotyping-by-sequencing approach was...
25 Oct, 2016
B. N. Gnanesh; Abhishek Bohra; M. Sharma; M. Byregowda; S. Pande; V. Wesley; Rachit K Saxena; K.B. Saxena; P. B. Kavi Kishor; Rajeev K. Varshney, 2016, "Intra-specific genetic map data from ICP 8863 × ICPL 20097 and TTB 7 × ICP 7035 populations", doi:10.21421/D2/L3GSS7, ICRISAT Dataverse, V1
The datset contains over 3000 SSR markers details on parental genotypes of each mapping population. Intra-specific genetic maps comprising of 11 linkage groups and 120 and 78 SSR loci were developed for ICP 8863 × ICPL 20097 and TTB 7 × ICP 7035 populations, respectively. Composi...
Oct 25, 2016
Spurthi N. Nayak; Hongyan Zhu; Nicy Varghese; Subhojit Datta; Hong-Kyu Choi; Ralf Horres; Ruth Jüngling; Jagbir Singh; P. B. Kavi Kishor; S. Sivaramakrishnan; Dave A. Hoisington; Günter Kahl; Peter Winter; Douglas R. Cook; Rajeev K. Varshney, 2016, "Inter-specific genetic map of C. arietinum ICC 4958 × C. reticulatum PI 489777", doi:10.21421/D2/KCPPYA, ICRISAT Dataverse, V1
311 SSRs and 71 gene based SNPs were developed from mapping population of C. arietinum ICC 4958 × C. reticulatum PI 489777 CMap Visualization Links: ICC 4958 X PI 489777 DOI: doi:10.1007/s00122-010-1265-1
25 Oct, 2016
Bhimana Gautami; Manish K. Pandey; V. Vadez; S. N. Nigam; P. Ratnakumar; L. Krishnamurthy; T. Radhakrishnan; Makanahally V. C. Gowda; M. L. Narasu; Dave A. Hoisington; S. J. Knapp; Rajeev K. Varshney, 2016, "Individual and consensus QTL maps of Groundnut from ICGS76 X CSMG84-1, ICGS44 X ICGS76 and TAG24 X ICGV86031", doi:10.21421/D2/SQSI3T, ICRISAT Dataverse, V1
With the aim of understanding the genetic basis and identification of quantitative trait loci (QTL) for drought tolerance, two new recombinant inbred line (RIL) mapping populations, namely ICGS 76 × CSMG 84-1 (RIL-2) and ICGS 44 × ICGS 76 (RIL-3), were used. CMap Visualization Li...
Oct 25, 2016
Mahendar Thudi; Abhishek Bohra; Spurthi N. Nayak; Nicy Varghese; Trushar M. Shah; R. Varma Penmetsa; Nepolean Thirunavukkarasu; Srivani Gudipati; Pooran M. Gaur; Pawan L. Kulwal; Hari D. Upadhyaya; P. B. Kavi Kishor; Peter Winter; Günter Kahl; Christopher D. Town; Andrzej Kilian; Douglas R. Cook; Rajeev K. Varshney, 2016, "Genetic map data of ICC 4958 (C. arietinum) × PI 489777 (C. reticulatum) with 1291 markers", doi:10.21421/D2/A9Y3ZC, ICRISAT Dataverse, V1
This dataset contains genetic map data developed based on recombinant inbred line (RIL) population ICC 4958 (C. arietinum) x PI 489777 (C. reticulatum). This map consists of 1,291 markers on eight linkage groups (LGs) spanning a total of 845.56 cM. The number of markers per linka...
Feb 11, 2017
Rajeev K. Varshney; Chi Song; Rachit K Saxena; Sarwar Azam; Sheng Yu; Andrew G Sharpe; Steven Cannon; Jongmin Baek; Benjamin D Rosen; Bunyamin Tar'an; Teresa Millan; Xudong Zhang; Larissa D Ramsay; Aiko Iwata; Ying Wang; William Nelson; Andrew D Farmer; Pooran M Gaur; Carol Soderlund; R Varma Penmetsa; Chunyan Xu; Arvind K Bharti; Weiming He; Peter Winter; Shancen Zhao; James K Hane; Noelia Carrasquilla-Garcia; Janet A Condie; Hari D. Upadhyaya; Mingcheng Luo; Mahendar Thudi; CLL Gowda; Narendra P Singh; Judith Lichtenzveig; Krishna K Gali; Josefa Rubio; N Nadarajan; Jaroslav Dolezel; Kailash C Bansal; Xun Xu; David Edwards; Gengyun Zhang; Guenter Kahl; Juan Gil; Karam B Singh; Swapan K Datta; Scott A Jackson; Jun Wang; Douglas R. Cook, 2017, "Data on draft genome sequence of chickpea (Cicer arietinum)", doi:10.21421/D2/HQZPCV, ICRISAT Dataverse, V1
The dataset contains genome sequence of the ~738 Mb chickpea genome from CDC Frontier, a kabuli variety, which contains an estimated 28,269 genes. Re-sequencing and analysis of 90 cultivated and wild genotypes from 10 different countries identifies both targets of breeding-associ...
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