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1 to 10 of 13 Results
Feb 11, 2017 - Genotypic
Rajeev K. Varshney; Chi Song; Rachit K Saxena; Sarwar Azam; Sheng Yu; Andrew G Sharpe; Steven Cannon; Jongmin Baek; Benjamin D Rosen; Bunyamin Tar'an; Teresa Millan; Xudong Zhang; Larissa D Ramsay; Aiko Iwata; Ying Wang; William Nelson; Andrew D Farmer; Pooran M Gaur; Carol Soderlund; R Varma Penmetsa; Chunyan Xu; Arvind K Bharti; Weiming He; Peter Winter; Shancen Zhao; James K Hane; Noelia Carrasquilla-Garcia; Janet A Condie; Hari D. Upadhyaya; Mingcheng Luo; Mahendar Thudi; CLL Gowda; Narendra P Singh; Judith Lichtenzveig; Krishna K Gali; Josefa Rubio; N Nadarajan; Jaroslav Dolezel; Kailash C Bansal; Xun Xu; David Edwards; Gengyun Zhang; Guenter Kahl; Juan Gil; Karam B Singh; Swapan K Datta; Scott A Jackson; Jun Wang; Douglas R. Cook, 2017, "Data on draft genome sequence of chickpea (Cicer arietinum)", doi:10.21421/D2/HQZPCV, ICRISAT Dataverse, V1
The dataset contains genome sequence of the ~738 Mb chickpea genome from CDC Frontier, a kabuli variety, which contains an estimated 28,269 genes. Re-sequencing and analysis of 90 cultivated and wild genotypes from 10 different countries identifies both targets of breeding-associ...
Feb 10, 2017 - Phenotypic
Gopalakrishnan, S; Srinivas, V; Alekhya, G; Prakash, B; Kudapa, H; Rathore, A; Rajeev K. Varshney, 2017, "Data on plant growth-promoting broad-spectrum Streptomyces sp. in chickpea and its effect on Grain yield", doi:10.21421/D2/VR7CIY, ICRISAT Dataverse, V1
This data set contain replicated observations on PGP capabilities of five strains (CAI-17, CAI-68, CAI-78, KAI-26 and KAI-27) under field conditions in chickpea in the 2012─13 and 2013─14 post-rainy seasons on Vertisols. All experiments were carried out at The International Crops...
25 Oct, 2016 - Genotypic
B. N. Gnanesh; Abhishek Bohra; M. Sharma; M. Byregowda; S. Pande; V. Wesley; Rachit K Saxena; K.B. Saxena; P. B. Kavi Kishor; Rajeev K. Varshney, 2016, "Intra-specific genetic map data from ICP 8863 × ICPL 20097 and TTB 7 × ICP 7035 populations", doi:10.21421/D2/L3GSS7, ICRISAT Dataverse, V1
The datset contains over 3000 SSR markers details on parental genotypes of each mapping population. Intra-specific genetic maps comprising of 11 linkage groups and 120 and 78 SSR loci were developed for ICP 8863 × ICPL 20097 and TTB 7 × ICP 7035 populations, respectively. Composi...
25 Oct, 2016 - Genotypic
Abhishek Bohra; Rachit K Saxena; B. N. Gnanesh; K.B. Saxena; M. Byregowda; Abhishek, Rathore; P. B. Kavi Kishor; Douglas R. Cook; Rajeev K. Varshney, 2016, "An intra-specific consensus genetic map data of Pigeonpea", doi:10.21421/D2/I4OVE2, ICRISAT Dataverse, V1
This dataset contains Markers data and genetic map. The availability of a cytoplasmic male sterility (CMS) system as facilitated the development and release of hybrids which are expected to enhance the productivity of pigeonpea. Recent advances in genomics and molecular breeding...
Oct 25, 2016 - Genotypic
Abhishek Bohra; Anuja Dubey; Rachit K Saxena; R. Varma Penmetsa; KN Poornima; Naresh Kumar; Andrew D Farmer; Gudipati Srivani; Hari D. Upadhyaya; Ragini Gothalwal; S Ramesh; Dhiraj Singh; K.B. Saxena; P. B. Kavi Kishor; Nagendra K Singh; Christopher D. Town; Gregory D May; Douglas R. Cook; Rajeev K. Varshney, 2016, "BES-SSR markers map of Pigeonpea from ICP 28 x ICPW 94", doi:10.21421/D2/XWFWPP, ICRISAT Dataverse, V1
With the objective of enhancing genomic resources for Pigeonpea, this study reports for the first time, large scale development of SSR markers from BAC-end sequences and their subsequent use for genetic mapping and hybridity testing in Pigeonpea CMap Visualization Links: ICP 28 x...
25 Oct, 2016 - Genotypic
Bhimana Gautami; Daniel Foncéka; Manish K. Pandey; Márcio C. Moretzsohn; Venkataswamy Sujay; Hongde Qin; Yanbin Hong; Issa Faye; Xiaoping Chen; BhanuPrakash Amindala; Trushar M. Shah; Makanahally V. C. Gowda; Shyam N. Nigam; Xuanqiang Liang; Dave A. Hoisington; Baozhu Guo; David J. Bertioli; Jean-Francois Rami; Rajeev K. Varshney, 2016, "Reference consensus genetic map of Groundnut", doi:10.21421/D2/WG4WCF, ICRISAT Dataverse, V1
A reference consensus genetic map was developed from 10 RILs and one BC population using the marker segregation data. This map comprised of 897 marker loci including 895 SSR and 2 cleaved amplified polymorphic sequence (CAPS). CMap Visualization Links: Reference consensus genetic...
25 Oct, 2016 - Genotypic
Bhimana Gautami; Manish K. Pandey; V. Vadez; S. N. Nigam; P. Ratnakumar; L. Krishnamurthy; T. Radhakrishnan; Makanahally V. C. Gowda; M. L. Narasu; Dave A. Hoisington; S. J. Knapp; Rajeev K. Varshney, 2016, "Individual and consensus QTL maps of Groundnut from ICGS76 X CSMG84-1, ICGS44 X ICGS76 and TAG24 X ICGV86031", doi:10.21421/D2/SQSI3T, ICRISAT Dataverse, V1
With the aim of understanding the genetic basis and identification of quantitative trait loci (QTL) for drought tolerance, two new recombinant inbred line (RIL) mapping populations, namely ICGS 76 × CSMG 84-1 (RIL-2) and ICGS 44 × ICGS 76 (RIL-3), were used. CMap Visualization Li...
Oct 25, 2016 - Genotypic
Deepa Jaganathan; Mahendar Thudi; Sandip Kale; Sarwar Azam; Manish Roorkiwal; Pooran M. Gaur; P. B. Kavi Kishor; Henry Nguyen; Tim Sutton; Rajeev K. Varshney, 2016, "Intra-specific genetic map of ICC 4958 x ICC 1882 by Genotyping-By-Sequencing approach", doi:10.21421/D2/HQ8RJV, ICRISAT Dataverse, V1
To enhance the marker density in the “QTL-hotspot” region, harboring several QTLs for drought tolerance-related traits identified on linkage group 04 (CaLG04) in chickpea recombinant inbred line (RIL) mapping population ICC 4958 × ICC 1882, a genotyping-by-sequencing approach was...
Oct 25, 2016 - Genotypic
Rajeev K. Varshney; Mahendar Thudi; Spurthi N. Nayak; Pooran M. Gaur; Junichi Kashiwagi; L. Krishnamurthy; Deepa Jaganathan; Jahnavi Koppolu; Abhishek Bohra; Shailesh Tripathi; Abhishek, Rathore; Aravind K. Jukanti; Veera Jayalakshmi; Anilkumar Vemula; S. J. Singh; Mohammad Yasin; M. S. Sheshshayee; K. P. Viswanatha, 2016, "Chickpea Individual and consensus genetic maps for ICC 283 x ICC 826, ICC 4958 x ICC 1882", doi:10.21421/D2/6D13J9, ICRISAT Dataverse, V1
Analysis of phenotypic data for 20 drought tolerance traits in 1–7 seasons at 1–5 locations together with genetic mapping data for two mapping populations provided 9 QTL clusters of which one present on CaLG04 has a high potential to enhance drought tolerance in chickpea improvem...
25 Oct, 2016 - Genotypic
Neha Gujaria; Ashish Kumar; Preeti Dauthal; Anuja Dubey; Pavana J Hiremath; BhanuPrakash Amindala; Andrew D Farmer; Mangla Bhide; Trushar Shah; Pooran M. Gaur; Hari D. Upadhyaya; Sabhyata Bhatia; Douglas R. Cook; Gregory D May; Rajeev K. Varshney, 2016, "Transcript map of Chickpea (Cicer arietinum L.)", doi:10.21421/D2/TOYQD2, ICRISAT Dataverse, V1
A transcript map has been constructed by the development and integration of genic molecular markers (GMMs) including single nucleotide polymorphism (SNP), genic microsatellite or simple sequence repeat (SSR) and intron spanning region (ISR)-based markers, on an inter-specific map...
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